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SARS-CoV-2Press ReleasesPublications

SARS-CoV-2 ‘origin’ studies out in Science

The COVID-19-causing coronavirus, SARS-CoV-2, likely first spread to humans from animals in two separate transmission events in a Wuhan market in late November 2019, according to a pair of analyses by international teams co-led by Scripps Research scientists. The analyses, published July 26, 2022 in Science and released in earlier, pre-print versions in February, were based mainly on the locations of cases…
July 29, 2022
SARS2 surveillancePress ReleasesPublications

SARS-CoV-2 surveillance study out in Nature

It can be a bit smellier than other ways of monitoring COVID-19, but analyzing wastewater is a cheaper, faster and more accurate way for public health officials and researchers to detect rising cases. Bits and pieces of the SARS-CoV-2 virus are flushed down toilets and washed down sinks by infected individuals; more copies of the virus found in sewage means…
July 13, 2022
Summer interns 2022NewsTraining

Welcome 2022 interns!

The Andersen Lab would like to officially introduce and welcome eight summer interns selected from two programs offered by Scripps Research and the Scripps Research Translational Institute! Our interns are working closely with a mentor on either a wet lab or computational project to learn about the methods we use to study the emergence, spread, and occurrence of infectious diseases. Selected from a…
July 13, 2022
GISAID collaborationNewsPress Releases

Collaboration with GISAID to release Outbreak.info API

The Center for Viral Systems Biology (CViSB) at Scripps Research is collaborating with GISAID, a global data science initiative that facilitates public access to SARS-CoV-2 genomic data, to effectively track the global evolution of SARS-CoV-2 variants on Outbreak.info. Today, CViSB announces its collaboration with GISAID on an application programming interface (API) that enables access to all processed data on Outbreak.info. (more…)
June 6, 2022
Catie AndersonPublications

SARS-CoV-2 early epidemic study out in Cell

Our study investigating one of the most explosive early COVID-19 outbreaks in the United States has been published in Cell. The emergence of the COVID-19 epidemic in the U.S. went largely undetected due to inadequate testing. New Orleans experienced one of the earliest and fastest accelerating outbreaks, coinciding with Mardi Gras. To gain insight into the emergence of SARS-CoV-2 in…
July 30, 2021
Congo RiverPublications

Ebola relapse study out in NEJM

Our study investigating a rare case of Ebola relapse has been published in the New England Journal of Medicine. Together with our colleagues at INDR in the Democratic Republic of Congo, the University of Nebraska Medical Center in Omaha, and several other institutions, we investigated a case of a vaccinated man who had already been sick with Ebola fell ill with…
April 9, 2021
graphical abstractPublications

Study on B.1.1.7 out in Cell

Our study investigating the spread of the B.1.1.7 SARS-CoV-2 variant first discovered in the UK has been published in the journal Cell. Together with our colleagues at the San Diego-based company Helix, we used testing data, genomics, and modeling to answer two simple questions - when was B.1.1.7 introduced into the US and how is it currently spreading in this country?…
April 9, 2021
MapPress Releases

Launch of outbreak.info variant tracking

The Center for Viral Systems Biology (CViSB) at Scripps Research is tracking the prevalence of new variants of SARS-CoV-2—the virus behind the COVID-19 pandemic—and making this information publicly available to drive global research efforts. The daily situation reports appear on Outbreak.info, a website created by the same team in early 2020, shortly after the emergence of COVID-19. The new reports add to the website’s…
February 17, 2021