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We are using pathogen genomics to investigate how viruses, including arenaviruses, filoviruses, coronaviruses, influenza viruses, orthopoxviruses, and arboviruses emerge, evolve, and cause large-scale outbreaks. Using a combination of computational biology, experimentation, and 'field' work, we aim to transform outbreak response and change the way we develop and apply effective countermeasures.

Andersen Lab at Scripps Research

At the Andersen Lab at Scripps Research we try to understand questions such as: how do viruses emerge, spread, evolve, and go from causing small-scale outbreaks to large-scale epidemics? How can we diagnose them better and discover novel ones? How do they develop resistance to countermeasures and what molecular and immunological factors govern the underlying mechanisms? Critically, by addressing these questions, can we develop new and effective vaccines and medicines, while informing outbreak responses? The research in our laboratory is aimed at tackling these questions using an integrated approach of computation, experimentation, genomics, and large-scale data analysis. We also more broadly employ quantitative approaches across scientific disciplines, ranging from microbiology to human immunology and genetics.

The Andersen Laboratory was established at Scripps Research in the summer of 2015 in beautiful La Jolla, California. We are strong proponents of open data and open science, and we are big believers in collaborating across scientific disciplines. To this end, we are actively engaged in several of our research initiatives, including the Global Health Initiative at Scripps Research, the Center for Viral Systems Biology, the Viral Hemorrhagic Fever Consortium, the West African Research Network for Infectious Diseases, SEARCH, and the WestNile 4K Project.

Ready to learn more about the lab? Check out the people working here, our research, publications, and data.

COVID-19 / SARS-CoV-2 Resources

People

Kristian

Professor

Andrew

Institute Investigator

Karthik

Institute Investigator

Refugio

Senior Lab Manager

Michelle

Senior Center Manager

Ethan

Admin

Emily

Guru

Mark

Project Scientist

Josh

Project Scientist

Jyothi

Postdoc

Brady

Clinical Fellow

Chrissy

Graduate Student

Praneeth

Graduate Student

Alana

Graduate Student

Dylan

Comp Staff

Maryam

Comp Staff

Ryin

Comp Staff

James

Comp Staff

Leandro

Comp Staff

Allison

Lab Staff

Christina

Lab Staff

Camille

Lab Staff

Yasmeen

Intern

Lilian

Intern

Edyth

Professional Collaborator

Noodle

Supreme Commander

Our Initiatives

News

PREVENT
Press Releases

Data analytics hub for CDC-funded pandemic preparedness

Under the leadership of UC San Diego, Scripps Research is partnering with several institutions to bolster national preparedness for respiratory viruses. UC San Diego (the primary award recipient) has been awarded a $5.7 million cooperative agreement with the Centers for Disease Control and Prevention (CDC). Scripps Research and its partners will join the CDC’s Community and Household Acute Respiratory Illness…
Jyothi
Other

Q&A with Global Health Researcher Jyothi Purushotham

Emerging infectious diseases pose a persistent global health threat, with the potential to cause widespread morbidity, mortality, and significant social and economic disruptions. Postdoctoral researcher Jyothi Purushotham is working to understand how pathogens interact with their hosts, which is essential for deciphering the mechanisms that drive infection, transmission, disease progression and pathogen evolution. These insights can guide the development of…
2024 Interns
News

Welcome 2024 Summer Interns

Please join the Andersen Lab in welcoming the seven summer interns selected from the Scripps Research Translational Institute Student Research Internship Program! Chosen from a large pool of candidates from around the country, these keen aspiring scientists are motivated to learn from leading researchers at Scripps Research. The new interns are working closely with a mentor on either a wet…